Insertion junction: LMJ.RY0402.097623_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.097623
Chromosome:chromosome 10
Location:6069681
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g463350 HRP3 Hydroxyproline-rich glycoprotein; (1 of 1) 2.7.1.107//2.7.11.18//3.2.1.4 - Diacylglycerol kinase (ATP) / Diglyceride kinase // [Myosin light-chain] kinase / Smooth-muscle-myosin-light-chain kinase // Cellulase / Endoglucanase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGAGTTGGTGACCCAGGTGGCGGCCAG
Internal bar code:CCAGAGGGGGTGATGAGTGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:240
LEAP-Seq percent confirming:76.6019
LEAP-Seq n confirming:1578
LEAP-Seq n nonconfirming:482
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGATGGTCTTCACGGTGG
Suggested primer 2:CGAATGCATAGCAAGCGATA