Insertion junction: LMJ.RY0402.097766_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.097766
Chromosome:chromosome 2
Location:1447929
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g083750 ROC75 (1 of 1) IPR006447//IPR009057//IPR017930 - Myb domain, plants // Homeodomain-like // Myb domain; Rhythm Of Chloroplast 75 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCACGAGCGGCCAAATTTCCGCCCAGG
Internal bar code:GCATCCGTGCGACAAAAGGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:98.6214
LEAP-Seq n confirming:12805
LEAP-Seq n nonconfirming:179
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAAGAGGGAAGACGAGC
Suggested primer 2:GTGTCTTAGAGGCGTGCTCC