Insertion junction: LMJ.RY0402.097816_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.097816
Chromosome:chromosome 17
Location:5869831
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g739850 LRRC6,Seahorse,DNAAF11,MOT47 (1 of 8) PF14580 - Leucine-rich repeat (LRR_9); Leucine-rich repeat-containing protein 6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGCCTTGCCTTGCCAGTATTCTTGAG
Internal bar code:GCATGTAACCGTTGTCGCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:331
LEAP-Seq percent confirming:84.8265
LEAP-Seq n confirming:2102
LEAP-Seq n nonconfirming:376
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTGTGAAAAAGCCAGGG
Suggested primer 2:CTTGCAGGTCCTCCAGAGTC