Insertion junction: LMJ.RY0402.097852_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.097852
Chromosome:chromosome 5
Location:1986974
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g241643 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTCGTCGCGCGCACGGTAGTGTCACTG
Internal bar code:GGCGCGCCCGGAGAGATGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:218
LEAP-Seq percent confirming:96.9274
LEAP-Seq n confirming:347
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGACGCTATTTGACCAG
Suggested primer 2:GAGTTGCAGAAGGGACTTGC