Insertion junction: LMJ.RY0402.097875_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.097875
Chromosome:chromosome 8
Location:4787269
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g384285 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGAGTACATGGCCAAGGCCTGGCACTT
Internal bar code:AGCGTCCAGGTTATTTCCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:320
LEAP-Seq percent confirming:66.3236
LEAP-Seq n confirming:1160
LEAP-Seq n nonconfirming:589
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTGGTGACTGGTGAGT
Suggested primer 2:TGTGTACGTGCAAGCTAGGC