Insertion junction: LMJ.RY0402.098017_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.098017
Chromosome:chromosome 10
Location:5111257
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g456250 TRX16,TRX25,TRL11 (1 of 4) PTHR10438//PTHR10438:SF255 - THIOREDOXIN // THIOREDOXIN M4, CHLOROPLASTIC; Thioredoxin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTCACTTTGTCACGCAAGTGCGCAACG
Internal bar code:GCACCACACCGAGCGCGGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:589
LEAP-Seq percent confirming:98.9806
LEAP-Seq n confirming:971
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCCCCAGCACAACGTAT
Suggested primer 2:TTCATGTCCCAGCATTTCAA