Insertion junction: LMJ.RY0402.098334_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.098334
Chromosome:chromosome 11
Location:1871232
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre11.g468050 VIPP2 (1 of 2) K03969 - phage shock protein A (pspA); Vesicle inducing protein in plastids 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCAAAACCGGTGTAGAGCCGCTAGCTA
Internal bar code:AGGCCGAGAAGACTCGTTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:308
LEAP-Seq percent confirming:98.7034
LEAP-Seq n confirming:609
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATCGATAGGTTTGCTCC
Suggested primer 2:CAGGTAGGGAAGACAGCAGC