Insertion junction: LMJ.RY0402.098617_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.098617
Chromosome:chromosome 8
Location:2178385
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g369600 MFT2,MAE2,MFT2 MATE efflux family protein; (1 of 1) IPR000104//IPR002528//IPR029303 - Antifreeze protein, type I // Multi antimicrobial extrusion protein // Polysaccharide biosynthesis protein, C-terminal domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTTGGCACGCAGGGTGATGGCAAGTAC
Internal bar code:GCAGAGCAAGCCAGCCGGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:421
LEAP-Seq percent confirming:98.9288
LEAP-Seq n confirming:13299
LEAP-Seq n nonconfirming:144
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGTAAGAGAGGGGTCCG
Suggested primer 2:GTCTGGTCTGGTGTGGGTCT