Insertion junction: LMJ.RY0402.098673_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.098673
Chromosome:chromosome 3
Location:4929032
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g179860 (1 of 1) 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase; tRNA-(m5C) methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGTGTCAATGCTACTGAGTTAACAGCT
Internal bar code:GACGGGTGTTGCATTGTTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:195
LEAP-Seq percent confirming:99.4181
LEAP-Seq n confirming:1196
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGAAAAGAGGTCACTCG
Suggested primer 2:TAGTGGAAGGTGGTTGAGGG