Insertion junction: LMJ.RY0402.098880_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.098880
Chromosome:chromosome 9
Location:1441600
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g398400 TRP5 Transient receptor potential ion channel protein; (1 of 46) PF00520 - Ion transport protein (Ion_trans) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGAAAGCGTGCATGGAGGCGTCAACC
Internal bar code:CTCCAGGAGTCGAGGGTGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:225
LEAP-Seq percent confirming:52.9026
LEAP-Seq n confirming:5167
LEAP-Seq n nonconfirming:4600
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTAACCGCTCAGAGTTG
Suggested primer 2:CTCGCCCATGGTTCTAATGT