Insertion junction: LMJ.RY0402.099043_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.099043
Chromosome:chromosome 3
Location:2596322
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g160600 (1 of 1) IPR000104//IPR000679//IPR013088 - Antifreeze protein, type I // Zinc finger, GATA-type // Zinc finger, NHR/GATA-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCACCGTGCAGCCCAGGCTGTTGCCCCA
Internal bar code:GTCACATCTCGGTCGTATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:803
LEAP-Seq percent confirming:98.364
LEAP-Seq n confirming:481
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGTCATAGGTGCTGTC
Suggested primer 2:ACAATCGACACCCTCTGACC