Insertion junction: LMJ.RY0402.099196_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.099196
Chromosome:chromosome 17
Location:4040895
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g729101 PHC37 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Putative pherophorin-chlamydomonas homolog CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTGACCTGTTCGGGAGTTCGTGGCAGC
Internal bar code:TAGGGGTGGAAGTCGCAGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:676
LEAP-Seq percent confirming:98.9339
LEAP-Seq n confirming:1856
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCTTCGAGTATGAAGC
Suggested primer 2:CTTCCATGTACCGTACCGCT