Insertion junction: LMJ.RY0402.099201_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.099201
Chromosome:chromosome 17
Location:644963
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g700500 (1 of 1) PTHR23196//PTHR23196:SF13 - PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGCCGTGTGTGAGCTCCAACCGGGTCT
Internal bar code:CCGGACGTACGCAAAACGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:768
LEAP-Seq percent confirming:99.8158
LEAP-Seq n confirming:542
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGGAGGTGTTCAAGGC
Suggested primer 2:AGCCCTCAGACAACGCTAAA