| Insertion cassette: | CIB1 |
| Side of cassette: | 3' |
| Strand: | - |
| Strain: | LMJ.RY0402.099321 |
| Chromosome: | chromosome 11 |
| Location: | 1399698 |
| Confidence (%): | 73 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre11.g467721 | (1 of 1) IPR027446 - Variant surface glycoprotein C-terminal domain | 5'UTR |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | AATGTGTAGAATTCTGTGTGAAGATAACAG |
| Internal bar code: | GTAGTCCGGTGACGTTACGTGG |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 580 |
| LEAP-Seq percent confirming: | 98.5488 |
| LEAP-Seq n confirming: | 2241 |
| LEAP-Seq n nonconfirming: | 33 |
| LEAP-Seq n unique pos: | 21 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | ACCTACCGACAGCGAGAAGA |
| Suggested primer 2: | AAGCAAGGGGACTCACAATG |