Insertion junction: LMJ.RY0402.099403_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.099403
Chromosome:chromosome 9
Location:7814347
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g416500 CGL151 Conserved in the Green Lineage; (1 of 2) IPR026939 - At2g23090-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCTTGCAAGGACTGCAGGTGGGCAGAA
Internal bar code:CTGGGTCTTGGACACGGATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:464
LEAP-Seq percent confirming:99.6472
LEAP-Seq n confirming:3389
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACAATGCGAGGGGTAGTCAC
Suggested primer 2:GCCTAAGGTCGAGTTTGCAG