Insertion junction: LMJ.RY0402.099455_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.099455
Chromosome:chromosome 8
Location:4376339
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g381800 (1 of 2) 5.3.3.2 - Isopentenyl-diphosphate Delta-isomerase / Methylbutenylpyrophosphate isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCCGCTGTGTCGGTCTACCCAACACA
Internal bar code:GCGTAGGGCGCGACAACAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:314
LEAP-Seq percent confirming:38.9772
LEAP-Seq n confirming:2599
LEAP-Seq n nonconfirming:4069
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCAAACATAAACCGTG
Suggested primer 2:TCCTCCCATACATACACGCA