Insertion junction: LMJ.RY0402.099540_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.099540
Chromosome:chromosome 5
Location:3172202
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g239550 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGGTGTGCTAAAACTGCGAAGGAACAA
Internal bar code:TGGATTCGACTCTCAGACACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:591
LEAP-Seq percent confirming:99.1477
LEAP-Seq n confirming:698
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACAGGGTGCATACTTGG
Suggested primer 2:ACCGTACCGGTAGTGTGCTC