Insertion junction: LMJ.RY0402.099726_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.099726
Chromosome:chromosome 3
Location:5730621
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g188100 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGAGAGGCATGGGTGGGATTGAAGGAG
Internal bar code:AGTCTCTCTATTTCGGTCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:477
LEAP-Seq percent confirming:97.4778
LEAP-Seq n confirming:1430
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAGTCAGCTTCTCCACC
Suggested primer 2:CTTCTGACGTTGCATCTGGA