Insertion junction: LMJ.RY0402.099840_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.099840
Chromosome:chromosome 9
Location:5104895
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g398734 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGATGGCACGGAGTGATAGTGCTTGTCT
Internal bar code:GCCTCGCGGAGGAGCCTGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:575
LEAP-Seq percent confirming:56.9648
LEAP-Seq n confirming:2834
LEAP-Seq n nonconfirming:2141
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCAGGCTCTGAAGGCTC
Suggested primer 2:AGCTACGTTACTTGCGGCAT