Insertion junction: LMJ.RY0402.099841_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.099841
Chromosome:chromosome 12
Location:3532671
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre12.g513300 CGL23 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTACAGACGGGCTGGGCGGCGGCAGTAG
Internal bar code:TAGCGCGACCCTACGTGGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:200
LEAP-Seq percent confirming:97.0641
LEAP-Seq n confirming:1091
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGGTCAGGCGGTGATAGG
Suggested primer 2:AGCCCACATAATCGTTCTGG