Insertion junction: LMJ.RY0402.099890_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.099890
Chromosome:chromosome 5
Location:1628892
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g243351 (1 of 3) IPR000477//IPR002156//IPR012337 - Reverse transcriptase domain // Ribonuclease H domain // Ribonuclease H-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCATGTAGCGACGTGCCGACGGGTCCAG
Internal bar code:TTCAACGCCTTTGTCCAGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:599
LEAP-Seq percent confirming:99.0423
LEAP-Seq n confirming:2482
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTAGAGCCCCTGTTGAG
Suggested primer 2:CCCTAGATCCTTCCTCAGGG