Insertion junction: LMJ.RY0402.100037_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.100037
Chromosome:chromosome 7
Location:3859646
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g338800 CGL125 (1 of 4) PF04676 - Protein similar to CwfJ C-terminus 2 (CwfJ_C_2); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAGTCAGCTGCGACAACTGCTGGGGCT
Internal bar code:CACTAGTTATGTGCGCTCAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:647
LEAP-Seq percent confirming:98.8977
LEAP-Seq n confirming:1615
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TATTCAATTGCCTCCAACCC
Suggested primer 2:CGATAAGCCAGCATAGAGGC