Insertion junction: LMJ.RY0402.100037_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.100037
Chromosome:chromosome 7
Location:3859649
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g338800 CGL125 (1 of 4) PF04676 - Protein similar to CwfJ C-terminus 2 (CwfJ_C_2); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTGCGCCTGCGCCTGCTCCACGCTTGA
Internal bar code:GAGTGCACAAGGTAAGGTAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:697
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TATTCAATTGCCTCCAACCC
Suggested primer 2:CGATAAGCCAGCATAGAGGC