Insertion junction: LMJ.RY0402.100116_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.100116
Chromosome:chromosome 17
Location:3239787
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g722616 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCCCTCCTCCCACCTATACAAACTCC
Internal bar code:TGGGTCGCGACTAACCTGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:513
LEAP-Seq percent confirming:83.957
LEAP-Seq n confirming:2423
LEAP-Seq n nonconfirming:463
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTATCATCAGCAGCACCAGC
Suggested primer 2:ACATTTGTAAGGCTGTCCCG