Insertion junction: LMJ.RY0402.100123_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.100123
Chromosome:chromosome 12
Location:2239890
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g508050 (1 of 1) PF01388//PF12047//PF15612 - ARID/BRIGHT DNA binding domain (ARID) // Cytosine specific DNA methyltransferase replication foci domain (DNMT1-RFD) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTCTGGTGTGGCGCTGCAGGCGAGGCG
Internal bar code:GGGCGTGACTAAGTCCACCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:694
LEAP-Seq percent confirming:51.9362
LEAP-Seq n confirming:9214
LEAP-Seq n nonconfirming:8527
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTTCCACTACATGCTGG
Suggested primer 2:CCACACAGTAGTGCAAGCGT