Insertion junction: LMJ.RY0402.100129_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.100129
Chromosome:chromosome_6
Location:3761489
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre06.g278157 antisense 5'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):TGGATCGCGAGGAAAGTTGAGGCAGGAGAA
Internal bar code:CTGCCGCGGCTCGGCTTGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:621
LEAP-Seq percent confirming:98.08
LEAP-Seq n confirming:3065
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTCTCACCAGCTCCACCT
Suggested primer 2:ATGTATGTGGGCCATTGCTT