Insertion junction: LMJ.RY0402.100149_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.100149
Chromosome:chromosome 5
Location:2697965
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g236700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATTGCTTTGCCTTACCTCCAGCGACTT
Internal bar code:TCCCCATTAACTGGGATTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:443
LEAP-Seq percent confirming:99.5549
LEAP-Seq n confirming:6486
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGCTCATTGGGGGTAGT
Suggested primer 2:AGCTGAAACCCGAGAACTCA