Insertion junction: LMJ.RY0402.100154_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.100154
Chromosome:chromosome 1
Location:4376214
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g029600 (1 of 3) 1.11.2.3 - Plant seed peroxygenase / Soybean peroxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGCCCCTAACCCCTCACTCACGTGCCG
Internal bar code:AACCGCTGTGCGACACAGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:642
LEAP-Seq percent confirming:97.2378
LEAP-Seq n confirming:5562
LEAP-Seq n nonconfirming:158
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGTACACGCAACGCAAG
Suggested primer 2:CACCCCCTTCCAGTTAGACA