Insertion junction: LMJ.RY0402.100226_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.100226
Chromosome:chromosome 17
Location:5849408
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g739700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCTGGACCATAAAGCTGGCTCTTCCCAG
Internal bar code:TAAGGTCATTCGACACGGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:558
LEAP-Seq percent confirming:89.5082
LEAP-Seq n confirming:546
LEAP-Seq n nonconfirming:64
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCGTCCGATTGGTTGTC
Suggested primer 2:TCTAGTCGAGCGTGGGAACT