Insertion junction: LMJ.RY0402.100297_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.100297
Chromosome:chromosome 6
Location:2047630
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g264550 CGL81 (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGCTGGTAGTTGCCGGGGTGTCGGACG
Internal bar code:ACTTGAGCACAGTGTTGTAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1017
LEAP-Seq percent confirming:96.7949
LEAP-Seq n confirming:604
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCACGTATGCACCAAATC
Suggested primer 2:TGAGCTCGCCAACTACAATG