Insertion junction: LMJ.RY0402.100375_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.100375
Chromosome:chromosome 6
Location:7517759
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g300550 TIC100 (1 of 14) PF02493 - MORN repeat (MORN); 100 kDa subunit of translocon at the inner membrane of chloroplasts intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACGCCGCCTCCGGCTGCCCCTAGCTGC
Internal bar code:TGATCACACGGTCGGCAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:347
LEAP-Seq percent confirming:80.3279
LEAP-Seq n confirming:343
LEAP-Seq n nonconfirming:84
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATCTAGGTGGCAGCAGG
Suggested primer 2:CCATGTCCTCTGTCAACCCT