Insertion junction: LMJ.RY0402.100398_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.100398
Chromosome:chromosome 16
Location:1018805
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g649150 (1 of 1) PF13414//PF13920 - TPR repeat (TPR_11) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGGTGTTCCACCCGTCGCGTACCACACA
Internal bar code:CCCCCTGATGTCAATATAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:482
LEAP-Seq percent confirming:91.3613
LEAP-Seq n confirming:1745
LEAP-Seq n nonconfirming:165
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTACCACGTCCCTGACT
Suggested primer 2:TTGCGGACTGGATGGATAGT