Insertion junction: LMJ.RY0402.100414_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.100414
Chromosome:chromosome 17
Location:5833743
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g739650 MAE1,MFT1 MATE efflux family protein; (1 of 5) PTHR11206//PTHR11206:SF94 - MULTIDRUG RESISTANCE PROTEIN // DNA-DAMAGE-INDUCIBLE PROTEIN F intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTGTGTGGGGGGCACGGGGTATGGGGT
Internal bar code:GACGAACTATTTCACCATACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:493
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTTATGGCATCATCGGA
Suggested primer 2:CAAAGGTTAGCGACACCCAT