Insertion junction: LMJ.RY0402.100501_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.100501
Chromosome:chromosome 9
Location:4897014
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g397808 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCGCTCTGGAGCTCGGCGGCGGTGTC
Internal bar code:TCGGCCTGTCTGAGTACCAGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:615
LEAP-Seq percent confirming:98.0339
LEAP-Seq n confirming:3640
LEAP-Seq n nonconfirming:73
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTCTGGACCCTCTCCAT
Suggested primer 2:CCTGAGGAGTAAGGACGCAG