Insertion junction: LMJ.RY0402.100618_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.100618
Chromosome:chromosome 17
Location:1584020
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g707650 SNRK2L (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGATAAAAGAAAGAAGGGGCGCCGCAGC
Internal bar code:GAGGGTATATAGGAAATATGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:782
LEAP-Seq percent confirming:99.6768
LEAP-Seq n confirming:3084
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGCTATTTTATGGAGCG
Suggested primer 2:CATACAGCGAAGGCACTTGA