Insertion junction: LMJ.RY0402.100697_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.100697
Chromosome:chromosome 9
Location:1310882
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g399000 SDR18 Short-chain dehydrogenase/reductase; (1 of 5) IPR002198//IPR002347//IPR003560//IPR013968 - Short-chain dehydrogenase/reductase SDR // Glucose/ribitol dehydrogenase // 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase // Polyketide synthase, ketoreductase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTTGCAGGAAAGCACTTGGGGGGAAGG
Internal bar code:GGAGGGGCCTTCAGTATGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:681
LEAP-Seq percent confirming:88.1079
LEAP-Seq n confirming:4638
LEAP-Seq n nonconfirming:626
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTTTTACCTAGGCGCTC
Suggested primer 2:TGGGCAAGCCTCCATATTAG