Insertion junction: LMJ.RY0402.100742_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.100742
Chromosome:chromosome 6
Location:4831565
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278350 AGD1 (1 of 1) 1.3.1.78 - Arogenate dehydrogenase (NADP(+)) / TyrAAT2; Arogenate/prephenate dehydrogenase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACTGATTAAACAAGTATGCTTAGGCG
Internal bar code:GTTGTCTACTCTGTGCCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:99.5724
LEAP-Seq n confirming:1630
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATTGCGAGGAAGATAAA
Suggested primer 2:ACCCAGCCATTTTGACAGAC