Insertion junction: LMJ.RY0402.100801_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.100801
Chromosome:chromosome 1
Location:1794327
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g009650 BUG25 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor; basal body protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGATACATTGGGCAATTGCCATGCATTG
Internal bar code:CATAAGGGAGGTCGCTACGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:644
LEAP-Seq percent confirming:98.4644
LEAP-Seq n confirming:1603
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCATGGCACCTCGTAAA
Suggested primer 2:ATCTCATGAGTGGACCCTGG