Insertion junction: LMJ.RY0402.100965_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.100965
Chromosome:chromosome 11
Location:2388036
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g474750 (1 of 1) 2.4.2.39 - Xyloglucan 6-xylosyltransferase / Xyloglucan 6-alpha-D-xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCTGCTCACCCCAGGCTCGCGGCCTGC
Internal bar code:CACTATTGGAGGTCAGTTACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:738
LEAP-Seq percent confirming:98.2476
LEAP-Seq n confirming:2579
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGACTGGTGGTACTCGT
Suggested primer 2:GTTGTCACCGGACTTGGAGT