Insertion junction: LMJ.RY0402.100965_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.100965
Chromosome:chromosome 11
Location:2388036
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g474750 (1 of 1) 2.4.2.39 - Xyloglucan 6-xylosyltransferase / Xyloglucan 6-alpha-D-xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAACCCGCCGTGAAAGCTTGAGGAGGTT
Internal bar code:CGAAACATAGTGGACTCCGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:671
LEAP-Seq percent confirming:99.4596
LEAP-Seq n confirming:3497
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGACTGGTGGTACTCGT
Suggested primer 2:GTTGTCACCGGACTTGGAGT