Insertion junction: LMJ.RY0402.100993_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.100993
Chromosome:chromosome_10
Location:4627775
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre10.g452950 TRP1 Transient receptor potential ion channel protein antisense intron

Insertion site details

Flanking sequence (orientation from cassette outwards):ATTAGACGGGAGATGAGGGATGGGCGGCGG
Internal bar code:ACTCGCTGGCCCTGTAAGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:529
LEAP-Seq percent confirming:88.8307
LEAP-Seq n confirming:9846
LEAP-Seq n nonconfirming:1238
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGAGTGCACCATCTTCTT
Suggested primer 2:GTCGTATTGTCGGTCGCTTT