Insertion junction: LMJ.RY0402.101034_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.101034
Chromosome:chromosome 8
Location:3696103
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g376740 (1 of 1) IPR008979//IPR018392 - Galactose-binding domain-like // LysM domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTTAACACAGGCTTCCGGTGCTCCAAC
Internal bar code:TGGGACAAGACAGGGGCCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:63
LEAP-Seq percent confirming:70.9077
LEAP-Seq n confirming:953
LEAP-Seq n nonconfirming:391
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTGTCGCCTCAACCTTC
Suggested primer 2:GATGGCTGAAAGAAAGCCAG