Insertion junction: LMJ.RY0402.101186_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.101186
Chromosome:chromosome 8
Location:2576435
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g372600 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAACATGATTAGTGATTCTCATACGGT
Internal bar code:CACACTCACGGTTCATTGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:402
LEAP-Seq percent confirming:99.4233
LEAP-Seq n confirming:3103
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCTGCCGTTTTTGCGTT
Suggested primer 2:CCGATCCAAATTGCTGAGAT