Insertion junction: LMJ.RY0402.101246_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.101246
Chromosome:chromosome 14
Location:3411859
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g630550 DEG1B,DEG13,DEG12 Deg protease; (1 of 3) PTHR22939//PTHR22939:SF81 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACAACCCCGACCCCTTCCCCCCCCACAC
Internal bar code:AAAACGATCGACGCCTTAGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:97
LEAP-Seq percent confirming:94.5455
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCAAGTAGCAGGGCTCCA
Suggested primer 2:CCCAGTGTGGTCAACATCAG