Insertion junction: LMJ.RY0402.101296_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.101296
Chromosome:chromosome 6
Location:3973571
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g278194 FAP236 (1 of 3) PF05217 - STOP protein (STOP); Flagellar Associated Protein 236 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCCGGTCTGCCGAGGCATCCGGGCTG
Internal bar code:CATGCTATGGCAGGTCTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:811
LEAP-Seq percent confirming:98.8257
LEAP-Seq n confirming:1599
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGAAGCATGATGGGTTGA
Suggested primer 2:ATGTAGGCACGTACCCAAGC