Insertion junction: LMJ.RY0402.101304_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.101304
Chromosome:chromosome 1
Location:684118
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g003550 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCGCCGTCTGGGCGGGCTTTGTTTGTT
Internal bar code:GCACGTCGAAACACAACGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:49
LEAP-Seq percent confirming:97.8431
LEAP-Seq n confirming:499
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGAGCTGGTTGAGGAGT
Suggested primer 2:CCACTTCCCCTTTCACAGAA