Insertion junction: LMJ.RY0402.101440_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.101440
Chromosome:chromosome 12
Location:3973588
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g516650 STPK6,STK6 Serine/threonine protein kinase; (1 of 1) IPR000719//IPR001245//IPR002290//IPR011009//IPR011050//IPR020635 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Pectin lyase fold/virulence factor // Tyrosine-protein kinase, catalytic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCTCTTAAGCAAGCCCATATGGGCACG
Internal bar code:GCTCTGAACATCCGCCCACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:573
LEAP-Seq percent confirming:89.0115
LEAP-Seq n confirming:2098
LEAP-Seq n nonconfirming:259
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATACTGCCGCTCTCTAC
Suggested primer 2:TGATGCTGTCTGGCAAAGTC