Insertion junction: LMJ.RY0402.101530_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.101530
Chromosome:chromosome 6
Location:7008299
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g296750 HYDEF,HYDEF1 (1 of 1) PTHR11649//PTHR11649:SF59//PTHR22976//PTHR22976:SF28 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // SUBFAMILY NOT NAMED // BIOTIN SYNTHASE // SUBFAMILY NOT NAMED; Iron hydrogenase assembly protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACACCGTTCGTCGCTTCCCATTTGCGT
Internal bar code:GAGGAAGCCGTAGGGGACGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:868
LEAP-Seq percent confirming:91.1987
LEAP-Seq n confirming:5668
LEAP-Seq n nonconfirming:547
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TGATATGCTTCTGTGGCTGC
Suggested primer 2:GATGGCGTTAGCGTACCATT