Insertion junction: LMJ.RY0402.101627_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.101627
Chromosome:chromosome 2
Location:4970839
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g104000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGGAAGGCTGTGGCTGCACCGCTCCAG
Internal bar code:TACCCTCAGAAAAAAGAGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:89.6321
LEAP-Seq n confirming:268
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AATACGTCACACGGCTTTCC
Suggested primer 2:TGTCATGCACTGTCAACGAA