Insertion junction: LMJ.RY0402.102336_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.102336
Chromosome:chromosome 16
Location:4295228
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g667900 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor; ANT-subfamily ortholog 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAACACACGCGCGCATGTGCACCGATT
Internal bar code:GGAGAGCGATCAGTTTCACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:527
LEAP-Seq percent confirming:99.1386
LEAP-Seq n confirming:3913
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGGCTGTGAACTGCT
Suggested primer 2:TTGCAAGAGTTAGAGCCGGT